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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16738648_16744584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16738648 - 16744584

Intron Length:

5937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGTC

5'SS Class:

major

3'SS Sequence:

TGAATTACACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTGATTTGAATT

Flanking Amino Acid:

INATMKQLEQRLQQAEKAQV

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

39.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

61.5

0.26

1.1

53.1

45.5

Minor 5ss

32.1

-2

3.9

49.3

47.2

Minor BPS

57.6

0.32

1.4

72.73

38.8

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016535

16732492 - 16757161

24670