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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16744683_16746128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16744683 - 16746128

Intron Length:

1446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAACA

Flanking Amino Acid:

INMEMYQKLQVSEDAMKEKN

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.5

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.3

0.57

70.3

38.9

Minor 5ss

38.7

-1.3

3.4

56.7

47.6

Minor BPS

71.5

0.67

1.5

83.69

29.9

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036914

16742516 - 16757117

14602

ENSAPLT00000016535

16732492 - 16757161

24670