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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16746297_16746928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16746297 - 16746928

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GTGTGATTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TTTTGTGTGATT

Flanking Amino Acid:

QLREESQLRQDMENELVVQV

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

69.4

0.44

62.7

43.3

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

48.8

-0

2.4

78.01

39.5

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016535

16732492 - 16757161

24670

ENSAPLT00000036914

16742516 - 16757117

14602