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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16747046_16747709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16747046 - 16747709

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CATATCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATGAAAA

Flanking Amino Acid:

ILMKTQHHLEVTKVDVEAEL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.1

38.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

75.5

0.58

0.9

69.8

36.1

Minor 5ss

34.8

-1.7

3.2

49.6

46.6

Minor BPS

47.6

-0.1

64.38

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016535

16732492 - 16757161

24670

ENSAPLT00000036914

16742516 - 16757117

14602