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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16750639_16751215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16750639 - 16751215

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTCACTTTATTA

Flanking Amino Acid:

KSDDDIGGKERNVQIAAILD

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

75.5

40.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.58

0.9

73.8

36.9

Minor 5ss

35.8

-1.6

3.2

51.3

45.1

Minor BPS

51.1

0.03

1.6

59.06

41.7

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036914

16742516 - 16757117

14602

ENSAPLT00000016535

16732492 - 16757161

24670