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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16754877_16756413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16754877 - 16756413

Intron Length:

1537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTTGTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGATTTTGAACT

Flanking Amino Acid:

AASVRDLPGLKTPLGRARAW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

74.9

0.56

0.9

67.5

37.8

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

65.4

0.56

1.4

78.22

37.7

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036914

16742516 - 16757117

14602

ENSAPLT00000016535

16732492 - 16757161

24670