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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16756532_16756987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16756532 - 16756987

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGTAA

5'SS Class:

major

3'SS Sequence:

TTTCTTCCCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTAAATGAATT

Flanking Amino Acid:

MEHCLKHGLKVRKSFLSYNK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

69.7

32.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

80.3

0.68

0.7

74.1

31.1

Minor 5ss

36.7

-1.5

3.2

45.7

49.5

Minor BPS

50.2

0.09

1.9

76.48

39.4

Associated Gene:

Gene:

RUFY2

Ensembl Gene ID:

ENSAPLG00000015834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036914

16742516 - 16757117

14602

ENSAPLT00000016535

16732492 - 16757161

24670