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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16771484_16773855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16771484 - 16773855

Intron Length:

2372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

TAAAAGTTGATT

Flanking Amino Acid:

SQMHNCFLYSRAVEEKIASI

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

73.9

0.54

0.9

66.2

39.8

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

44.7

-0.3

2.2

62.43

41.5

Associated Gene:

Gene:

DNA2

Ensembl Gene ID:

ENSAPLG00000015576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016279

16761726 - 16780805

19080