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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16777784_16778970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16777784 - 16778970

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTGTTGTATCA

Flanking Amino Acid:

RRAVLSEKFRGSDSGSRQML

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

79.7

0.67

0.9

77.9

35.9

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

46.5

-0.2

2.2

65.74

41.7

Associated Gene:

Gene:

DNA2

Ensembl Gene ID:

ENSAPLG00000015576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016279

16761726 - 16780805

19080