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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16779155_16780096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16779155 - 16780096

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGTTTTTTAATG

Flanking Amino Acid:

DTELCILRNGWECVPVVPGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

65.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.72

0.8

76.8

37.1

Minor 5ss

31.2

-2.2

3.3

38.7

40.9

Minor BPS

66.2

0.37

1.3

64.11

38.3

Associated Gene:

Gene:

DNA2

Ensembl Gene ID:

ENSAPLG00000015576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016279

16761726 - 16780805

19080