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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16780277_16780794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16780277 - 16780794

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTGCC

5'SS Class:

major

3'SS Sequence:

ATTGTTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TATTCACAAATT

Flanking Amino Acid:

MADSFRKTVTDSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.2

68.2

38.6

Major BPS

82.3

0.8

83.6

25.8

Major PPT

81.7

0.71

0.9

78.6

39.1

Minor 5ss

38.1

-1.3

3.4

53.2

44.1

Minor BPS

48.6

-0

2.2

75.29

41.2

Associated Gene:

Gene:

DNA2

Ensembl Gene ID:

ENSAPLG00000015576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016279

16761726 - 16780805

19080