Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_16788787_16794496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16788787 - 16794496

Intron Length:

5710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTAATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATA

Flanking Amino Acid:

VHRLMAGSMAGITAVICTYP

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.4

1.2

68.8

40.3

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

75.5

0.8

1.1

78.11

Associated Gene:

Gene:

SLC25A16

Ensembl Gene ID:

ENSAPLG00000015185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015843

16784200 - 16799260

15061