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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16836006_16837199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16836006 - 16837199

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

AACCTGCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ATTGTCTCAACC

Flanking Amino Acid:

QSELPTCDCVEQIIEKDEGP

Intron Amino Acid Position:

1483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

77.1

37.8

Major BPS

78.2

0.7

77.9

32.1

Major PPT

69.8

0.45

61.2

39.3

Minor 5ss

-1.5

48.7

41.1

Minor BPS

62.6

0.37

1.6

72.6

38.5

Associated Gene:

Gene:

TET1

Ensembl Gene ID:

ENSAPLG00000024977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019202

16814986 - 16870989

56004