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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16896606_16897751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16896606 - 16897751

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTCCTT

5'SS Class:

major

3'SS Sequence:

GTTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GATGCCGTATGT

Flanking Amino Acid:

QPLLQQPQQKGGLLQPPVRL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.1

61.8

44.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

86.7

0.82

0.8

84.6

Minor 5ss

37.4

-1.4

3.5

56.5

47.7

Minor BPS

42.1

-0.5

2.4

61.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014530

16892169 - 16903301

11133