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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16898370_16898834_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16898370 - 16898834

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCAGTCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TATCTTTCAAAT

Flanking Amino Acid:

TVQFSKFSLDCCDMMELRRR

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

31.3

Major BPS

77.3

0.68

81.5

Major PPT

68.7

0.42

0.9

37.9

Minor 5ss

50.1

0.01

2.4

63.4

43.4

Minor BPS

53.5

0.19

1.6

72.06

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014530

16892169 - 16903301

11133