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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16943841_16945123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16943841 - 16945123

Intron Length:

1283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGAACAT

U12 Branch Point Sequence:

GTTGAGAGAACA

Flanking Amino Acid:

QEKRRGRAPKVLVLAPTREL

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

74.9

38.1

Major BPS

48.8

-0

1.2

55.1

40.4

Major PPT

75.2

0.57

0.9

37.1

Minor 5ss

45.1

-0.5

2.6

57.8

46.8

Minor BPS

38.9

-0.8

2.4

55.21

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013616

16940556 - 16954778

14223