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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16947543_16949273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16947543 - 16949273

Intron Length:

1731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

AGTCCTATAATA

Flanking Amino Acid:

ELALNASIKQDCQSLHGDIP

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.6

31.1

Major BPS

75.5

0.63

1.1

34.4

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

-0.2

2.5

66.9

44.3

Minor BPS

55.3

0.16

1.6

65.18

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013616

16940556 - 16954778

14223