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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16958810_16959929_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16958810 - 16959929

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAACTTAC

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTACAT

U12 Branch Point Sequence:

ATGAGCTACATT

Flanking Amino Acid:

QDERRGRSPKVLVLVPTREL

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

72.1

34.3

Major BPS

52.4

0.06

1.3

62.9

43.3

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

47.7

-0.2

2.5

61.3

37.7

Minor BPS

40.7

-0.6

2.3

58.26

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013530

16955343 - 16966560

11218