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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16960802_16961305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16960802 - 16961305

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

GATGTCTGAAAT

Flanking Amino Acid:

EEILGFAYKKGSENNPQTLL

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

79.1

0.66

0.9

73.4

37.1

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

51.5

0.13

1.7

68.07

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013530

16955343 - 16966560

11218