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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16961835_16962225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16961835 - 16962225

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGGG

5'SS Class:

major

3'SS Sequence:

GTGTCATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GACATCTTAACC

Flanking Amino Acid:

ELALNSSLKQDAQSLHGDIP

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.1

51.7

45.2

Major BPS

77.3

0.68

81.5

Major PPT

66.8

0.38

1.1

61.5

43.7

Minor 5ss

27.6

-2.6

3.6

38.4

46.6

Minor BPS

64.5

0.44

1.3

64.84

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013530

16955343 - 16966560

11218