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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16964581_16965369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16964581 - 16965369

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAATAGC

5'SS Class:

major

3'SS Sequence:

GTTTCTTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

GTATTTGCAAAT

Flanking Amino Acid:

QQRSFLNSTAGYVTMVLKCS

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

69.8

40.9

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

74.8

0.56

75.8

33.1

Minor 5ss

35.9

-1.6

2.8

46.1

42.4

Minor BPS

43.6

-0.4

2.1

62.61

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013530

16955343 - 16966560

11218