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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16965505_16965733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16965505 - 16965733

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTTTTTGATT

Flanking Amino Acid:

SAMRFLKGKMGVCFDIPVNE

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

76.7

34.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

85.8

0.81

0.6

81.4

23.8

Minor 5ss

40.6

-1

3.2

54.1

45.6

Minor BPS

70.3

0.72

1.1

81.5

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013530

16955343 - 16966560

11218