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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16965779_16966380_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16965779 - 16966380

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

GCCGCTGTGACG

Flanking Amino Acid:

IPVNELNQIQERWQDTRRWQ

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

0.22

1.2

52.4

43.3

Major PPT

75.8

0.58

68.6

42.1

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

42.4

-0.7

2.1

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013530

16955343 - 16966560

11218