Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_16971100_16972234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16971100 - 16972234

Intron Length:

1135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

GTTCCAGTGACA

Flanking Amino Acid:

ATLSQYYLSKQCFMESRHCL

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

70.5

36.1

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

82.1

0.72

0.8

80.6

31.5

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

47.5

-0.2

2.3

66.31

39.5

Associated Gene:

Gene:

KIFBP

Ensembl Gene ID:

ENSAPLG00000012980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013509

16966799 - 16975421

8623