Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_16973902_16974542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16973902 - 16974542

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTACTA

Flanking Amino Acid:

LLQSARKLLEDDIGEMDSFR

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.6

0.91

0.7

88.7

28.3

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

53.4

0.1

73.53

38.3

Associated Gene:

Gene:

KIFBP

Ensembl Gene ID:

ENSAPLG00000012980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013509

16966799 - 16975421

8623