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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16984898_16986572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16984898 - 16986572

Intron Length:

1675

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCAGCGGCC

5'SS Class:

major

3'SS Sequence:

CTTGTCATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ATTTACCTAATT

Flanking Amino Acid:

PGAGGARRRRSFLGGFFSPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.7

0.25

1.3

37.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

79.4

0.66

0.9

70.2

40.1

Minor 5ss

23.9

-3

4.4

32.3

42.9

Minor BPS

63.9

0.52

1.8

84.53

35.6

Associated Gene:

Gene:

VPS26A

Ensembl Gene ID:

ENSAPLG00000012577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013104

16984820 - 16994860

10041