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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16993839_16994746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16993839 - 16994746

Intron Length:

908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TGGTTCAAAAGT

Flanking Amino Acid:

EEDRRYFKQQEIILWRKAPE

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.8

Major BPS

68.1

0.45

73.5

28.6

Major PPT

74.1

0.54

0.7

24.9

Minor 5ss

45.5

-0.5

3.1

65.3

46.1

Minor BPS

45.1

-0.2

2.1

64.77

45.6

Associated Gene:

Gene:

VPS26A

Ensembl Gene ID:

ENSAPLG00000012577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013104

16984820 - 16994860

10041