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Intron Name: Anas_platyrhynchos_platyrhynchos_6_16996887_17000219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16996887 - 17000219

Intron Length:

3333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGTGCG

5'SS Class:

major

3'SS Sequence:

TCTTTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

TGTTCAGCAAGC

Flanking Amino Acid:

GAELTRPLDKAEVLKNLNKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

56.7

42.7

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

92.2

0.95

0.6

88.3

21.3

Minor 5ss

25.7

-2.8

3.1

23.3

37.3

Minor BPS

42.2

-0.6

2.5

60.67

44.1

Associated Gene:

Gene:

SUPV3L1

Ensembl Gene ID:

ENSAPLG00000012258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048464

16995774 - 17011856

16083

ENSAPLT00000012809

16996652 - 17012148

15497