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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17000667_17001764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17000667 - 17001764

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

AGGCATTCAACT

Flanking Amino Acid:

IILNDICCGAGHVDDLFPFF

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.8

1.18

0.7

98.3

5.31

Major BPS

70.6

0.51

73.3

31.3

Major PPT

81.2

0.7

0.8

73.5

37.1

Minor 5ss

-2.3

3.8

44.9

43.2

Minor BPS

47.8

-0

1.7

62.26

41.2

Associated Gene:

Gene:

SUPV3L1

Ensembl Gene ID:

ENSAPLG00000012258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048464

16995774 - 17011856

16083

ENSAPLT00000012809

16996652 - 17012148

15497