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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17001880_17002452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17001880 - 17002452

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTGAG

5'SS Class:

major

3'SS Sequence:

GTGTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

KISDLRLPPNWYPEARAIQR

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.3

41.1

Major BPS

60.7

0.27

65.3

28.1

Major PPT

73.3

0.52

69.2

46.1

Minor 5ss

27.6

-2.6

2.9

28.9

37.2

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

SUPV3L1

Ensembl Gene ID:

ENSAPLG00000012258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048464

16995774 - 17011856

16083

ENSAPLT00000012809

16996652 - 17012148

15497