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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17003692_17003956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17003692 - 17003956

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTACGTATA

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TTCATCATATTT

Flanking Amino Acid:

TIEMCSTNTPYEVAVIDEIQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

72.9

37.8

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

78.3

0.64

82.6

32.9

Minor 5ss

40.8

-1

3.1

56.5

42.2

Minor BPS

48.1

-0

1.9

68.89

42.4

Associated Gene:

Gene:

SUPV3L1

Ensembl Gene ID:

ENSAPLG00000012258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012809

16996652 - 17012148

15497

ENSAPLT00000048464

16995774 - 17011856

16083