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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17004035_17004230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17004035 - 17004230

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

GGGTCTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

AACTTTTTACTT

Flanking Amino Acid:

RGWAWTRALLGLSAEEIHVC

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

68.6

0.42

1.1

65.4

45.5

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

53.7

0.19

1.5

66.17

39.5

Associated Gene:

Gene:

SUPV3L1

Ensembl Gene ID:

ENSAPLG00000012258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048464

16995774 - 17011856

16083

ENSAPLT00000012809

16996652 - 17012148

15497