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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17005040_17005425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17005040 - 17005425

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

GCTATGTGAAGT

Flanking Amino Acid:

CAVIYGSLPPGTKLEQAKKF

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

82.3

0.73

0.8

81.3

30.8

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

41.3

-0.5

2.3

57.54

45.1

Associated Gene:

Gene:

SUPV3L1

Ensembl Gene ID:

ENSAPLG00000012258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048464

16995774 - 17011856

16083

ENSAPLT00000012809

16996652 - 17012148

15497