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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17008980_17010809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17008980 - 17010809

Intron Length:

1830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTCACCGAATC

Flanking Amino Acid:

EPFVCTTLLKFARQFSRNEP

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

84.1

30.2

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

39.2

-1.2

2.8

46.3

Minor BPS

48.3

-0.1

1.9

67.14

37.7

Associated Gene:

Gene:

SUPV3L1

Ensembl Gene ID:

ENSAPLG00000012258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012809

16996652 - 17012148

15497

ENSAPLT00000048464

16995774 - 17011856

16083