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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17026003_17026473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17026003 - 17026473

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTGTTCCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TGAGTCTAAAGA

Flanking Amino Acid:

IDGGLYKTHPQYPKRLHKVV

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

82.3

0.73

0.8

77.6

31.2

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

46.1

-0.3

55.93

43.3

Associated Gene:

Gene:

HKDC1

Ensembl Gene ID:

ENSAPLG00000011408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011966

17016698 - 17032582

15885