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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17028748_17029598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17028748 - 17029598

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTGA

5'SS Class:

major

3'SS Sequence:

TCTTTCCTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TCTGGCTGAAGC

Flanking Amino Acid:

DPNCEIGLIAGTGSNVCYME

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.1

41.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

80.3

0.68

0.7

73.6

31.4

Minor 5ss

34.4

-1.8

3.5

47.2

48.2

Minor BPS

45.5

-0.3

2.2

58.45

46.5

Associated Gene:

Gene:

HKDC1

Ensembl Gene ID:

ENSAPLG00000011408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011966

17016698 - 17032582

15885