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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17052294_17056313_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17052294 - 17056313

Intron Length:

4020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCACATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CACATTTTAATC

Flanking Amino Acid:

TFVRSIPDGSEKGDFIALDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.2

0.48

0.9

66.3

34.9

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

54.1

0.11

1.3

54.92

Associated Gene:

Gene:

HK1

Ensembl Gene ID:

ENSAPLG00000009913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042364

17047517 - 17077508

29992

ENSAPLT00000010438

17041319 - 17077481

36163