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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17056463_17060936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17056463 - 17060936

Intron Length:

4474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CCTTTCTTACAG

Flanking Amino Acid:

EDIMHGSGTRLFDHVAECLG

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.6

0.78

0.7

78.9

26.8

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

49.9

-0.1

1.8

55.39

46.1

Associated Gene:

Gene:

HK1

Ensembl Gene ID:

ENSAPLG00000009913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042364

17047517 - 17077508

29992

ENSAPLT00000010438

17041319 - 17077481

36163