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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17061057_17063406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17061057 - 17063406

Intron Length:

2350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

AATGTATTGAGT

Flanking Amino Acid:

FPCRQSKLDEGVLITWTKRF

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

82.9

0.74

0.9

83.9

31.1

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

45.7

-0.2

1.9

62.6

41.6

Associated Gene:

Gene:

HK1

Ensembl Gene ID:

ENSAPLG00000009913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042364

17047517 - 17077508

29992

ENSAPLT00000010438

17041319 - 17077481

36163