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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17065138_17065692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17065138 - 17065692

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

CCCTCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGGAC

U12 Branch Point Sequence:

CCTTGGGTGACT

Flanking Amino Acid:

DRGSLNPGKQLFEKMVSGLY

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

61.7

38.8

Major BPS

48.5

-0

1.5

48.8

46.3

Major PPT

78.6

0.64

0.7

72.5

25.7

Minor 5ss

29.5

-2.3

3.2

40.9

45.3

Minor BPS

39.9

-0.7

2.8

62.04

48.4

Associated Gene:

Gene:

HK1

Ensembl Gene ID:

ENSAPLG00000009913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042364

17047517 - 17077508

29992

ENSAPLT00000010438

17041319 - 17077481

36163