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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17065849_17067518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17065849 - 17067518

Intron Length:

1670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

GTTCCTTTACCT

Flanking Amino Acid:

FETKHVSAIEKSKEGLNKAK

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.7

30.1

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

0.7

76.4

25.6

Minor 5ss

33.3

-1.9

2.7

38.5

32.5

Minor BPS

66.5

0.6

1.6

82.13

39.2

Associated Gene:

Gene:

HK1

Ensembl Gene ID:

ENSAPLG00000009913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042364

17047517 - 17077508

29992

ENSAPLT00000010438

17041319 - 17077481

36163