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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17068748_17069180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17068748 - 17069180

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGC

5'SS Class:

major

3'SS Sequence:

TATTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TATTCTTTTACA

Flanking Amino Acid:

TFVRSTPDGTENGDFLALDL

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

61.3

43.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

89.3

0.88

0.7

30.6

Minor 5ss

30.9

-2.2

3.4

43.1

44.1

Minor BPS

72.3

0.7

1.5

80.29

35.7

Associated Gene:

Gene:

HK1

Ensembl Gene ID:

ENSAPLG00000009913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042364

17047517 - 17077508

29992

ENSAPLT00000010438

17041319 - 17077481

36163