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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17071608_17073444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17071608 - 17073444

Intron Length:

1837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATTTCACTATTT

Flanking Amino Acid:

DPNCEIGLIVGTGSNACYME

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.9

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

93.6

0.98

0.6

92.4

17.8

Minor 5ss

44.3

-0.6

3.2

57.9

46.7

Minor BPS

49.2

0.02

2.1

76.59

39.8

Associated Gene:

Gene:

HK1

Ensembl Gene ID:

ENSAPLG00000009913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042364

17047517 - 17077508

29992

ENSAPLT00000010438

17041319 - 17077481

36163