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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17083901_17084486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17083901 - 17084486

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGGT

5'SS Class:

major

3'SS Sequence:

GTGTTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAC

U12 Branch Point Sequence:

CCAGGAATAACA

Flanking Amino Acid:

YEHQVNAKKKFVKTMVVVVI

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.3

69.9

41.1

Major BPS

52.3

0.06

1.1

61.1

34.5

Major PPT

82.1

0.72

0.9

73.5

41.8

Minor 5ss

27.6

-2.6

3.3

39.4

45.8

Minor BPS

39.2

-0.8

2.1

45.8

43.3

Associated Gene:

Gene:

TACR2

Ensembl Gene ID:

ENSAPLG00000013012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023622

17083071 - 17092206

9136

ENSAPLT00000013556

17083071 - 17092206

9136