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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17084644_17087617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17084644 - 17087617

Intron Length:

2974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGAGAA

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

ATGTACTGACGA

Flanking Amino Acid:

PDDVGSKHQLTYHIAVIVLI

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.3

71.3

34.5

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

89.9

0.9

0.7

88.4

28.7

Minor 5ss

31.1

-2.2

3.3

37.4

40.7

Minor BPS

43.5

-0.4

2.1

55.49

43.2

Associated Gene:

Gene:

TACR2

Ensembl Gene ID:

ENSAPLG00000013012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023622

17083071 - 17092206

9136

ENSAPLT00000013556

17083071 - 17092206

9136