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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17192233_17195997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17192233 - 17195997

Intron Length:

3765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGATCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TCTGGTTTGATC

Flanking Amino Acid:

KGQCAEYPHRLLPLLNSVRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.9

38.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

78.5

0.64

0.9

74.5

40.4

Minor 5ss

35.4

-1.7

44.5

Minor BPS

48.8

-0.1

1.9

60.22

40.5

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633