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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17199095_17199542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17199095 - 17199542

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TCTTTTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCTTTTGCAACA

Flanking Amino Acid:

PGQPGPIGPPGRVGEPGKPG

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.4

47.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

77.1

0.61

0.9

73.4

35.9

Minor 5ss

39.7

-1.2

42.3

Minor BPS

48.6

-0.1

2.2

66.33

40.9

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012619

17190733 - 17219365

28633

ENSAPLT00000038255

17190733 - 17219365

28633