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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17202494_17203054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17202494 - 17203054

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCGCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTCT

U12 Branch Point Sequence:

TTGTTCTTCGCT

Flanking Amino Acid:

HGLPGASGPKGEKGDAGIKG

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

35.5

Major BPS

36.2

-0.8

4.3

65.7

43.2

Major PPT

64.7

0.33

1.1

40.1

Minor 5ss

40.9

-1

3.2

59.5

Minor BPS

45.1

-0.2

3.6

79.11

43.4

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633