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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17208922_17209724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17208922 - 17209724

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTTTTCTCACTT

Flanking Amino Acid:

APGLAAAGMKGEPGTPGEKG

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

33.4

Major BPS

0.87

0.8

85.6

Major PPT

74.6

0.55

0.8

67.4

33.8

Minor 5ss

38.3

-1.3

2.8

51.3

45.1

Minor BPS

0.45

1.8

83.48

38.1

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633