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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17209752_17210312_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17209752 - 17210312

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCTGT

5'SS Class:

major

3'SS Sequence:

CTTCCCCACGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

TCTTCCCCACGA

Flanking Amino Acid:

KGEPGTPGEKGQPGVPGRMG

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.1

62.7

44.3

Major BPS

63.2

0.33

63.6

30.5

Major PPT

59.9

0.22

60.6

28.5

Minor 5ss

44.6

-0.6

3.1

65.7

45.4

Minor BPS

43.3

-0.5

2.3

59.96

45.8

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633